## taxon_id	STRING_type	STRING_name_compact	official_name_NCBI
394	periphery	Rhizobium sp. NGR234	Rhizobium NGR234
882	core	Desulfovibrio vulgaris Hildenborough	Desulfovibrio vulgaris Hildenborough
883	periphery	Desulfovibrio vulgaris Miyazaki	Desulfovibrio vulgaris  Miyazaki F 
1140	periphery	Synechococcus elongatus 7942	Synechococcus elongatus PCC 7942
1148	core	Synechocystis sp. 6803	Synechocystis PCC6803
2098	periphery	Mycoplasma hominis	Mycoplasma hominis
2850	periphery	Phaeodactylum tricornutum	Phaeodactylum tricornutum
3055	periphery	Chlamydomonas reinhardtii	Chlamydomonas reinhardtii
3218	core	Physcomitrella patens	Physcomitrella patens
3694	periphery	Populus trichocarpa	Populus trichocarpa
3702	core	Arabidopsis thaliana	Arabidopsis thaliana
4558	periphery	Sorghum bicolor	Sorghum bicolor
4896	core	Schizosaccharomyces pombe	Schizosaccharomyces pombe
4924	core	Pichia stipitis	Pichia stipitis
4929	periphery	Pichia guilliermondii	Pichia guilliermondii
4932	core	Saccharomyces cerevisiae	Saccharomyces cerevisiae
4952	core	Yarrowia lipolytica	Yarrowia lipolytica
4959	core	Debaryomyces hansenii	Debaryomyces hansenii
5057	periphery	Aspergillus clavatus	Aspergillus clavatus
5059	periphery	Aspergillus flavus	Aspergillus flavus
5061	periphery	Aspergillus niger	Aspergillus niger
5062	periphery	Aspergillus oryzae	Aspergillus oryzae
5085	core	Aspergillus fumigatus	Aspergillus fumigatus
5141	core	Neurospora crassa	Neurospora crassa
5270	core	Ustilago maydis	Ustilago maydis
5306	periphery	Phanerochaete chrysosporium	Phanerochaete chrysosporium
5476	core	Candida albicans	Candida albicans
5518	periphery	Gibberella zeae	Gibberella zeae
5671	core	Leishmania infantum	Leishmania infantum
5691	core	Trypanosoma brucei	Trypanosoma brucei
5722	core	Trichomonas vaginalis	Trichomonas vaginalis
5807	core	Cryptosporidium parvum	Cryptosporidium parvum
5833	core	Plasmodium falciparum	Plasmodium falciparum
5850	periphery	Plasmodium knowlesi	Plasmodium knowlesi
5855	periphery	Plasmodium vivax	Plasmodium vivax
5874	periphery	Theileria annulata	Theileria annulata
5875	periphery	Theileria parva	Theileria parva
5911	core	Tetrahymena thermophila	Tetrahymena thermophila
6035	periphery	Encephalitozoon cuniculi	Encephalitozoon cuniculi
6085	core	Hydra magnipapillata	Hydra magnipapillata
6182	core	Schistosoma japonicum	Schistosoma japonicum
6238	periphery	Caenorhabditis briggsae	Caenorhabditis briggsae
6239	core	Caenorhabditis elegans	Caenorhabditis elegans
6945	core	Ixodes scapularis	Ixodes scapularis
7070	core	Tribolium castaneum	Tribolium castaneum
7159	periphery	Aedes aegypti	Aedes aegypti
7165	periphery	Anopheles gambiae	Anopheles gambiae
7176	periphery	Culex quinquefasciatus	Culex quinquefasciatus
7217	periphery	Drosophila ananassae	Drosophila ananassae
7222	periphery	Drosophila grimshawi	Drosophila grimshawi
7227	core	Drosophila melanogaster	Drosophila melanogaster
7237	periphery	Drosophila pseudoobscura	Drosophila pseudoobscura
7244	periphery	Drosophila virilis	Drosophila virilis
7245	periphery	Drosophila yakuba	Drosophila yakuba
7260	periphery	Drosophila willistoni	Drosophila willistoni
7425	core	Nasonia vitripennis	Nasonia vitripennis
7460	core	Apis mellifera	Apis mellifera
7668	core	Strongylocentrotus purpuratus	Strongylocentrotus purpuratus
7719	core	Ciona intestinalis	Ciona intestinalis
7739	core	Branchiostoma floridae	Branchiostoma floridae
7955	periphery	Danio rerio	Danio rerio
8090	periphery	Oryzias latipes	Oryzias latipes
8364	core	Xenopus (Silurana) tropicalis	Xenopus tropicalis
9031	core	Gallus gallus	Gallus gallus
9258	core	Ornithorhynchus anatinus	Ornithorhynchus anatinus
9361	periphery	Dasypus novemcinctus	Dasypus novemcinctus
9544	periphery	Macaca mulatta	Macaca mulatta
9598	periphery	Pan troglodytes	Pan troglodytes
9600	periphery	Pongo pygmaeus	Pongo pygmaeus
9606	core	Homo sapiens	Homo sapiens
9615	core	Canis lupus familiaris	Canis familiaris
9685	periphery	Felis catus	Felis catus
9796	periphery	Equus caballus	Equus caballus
9823	periphery	Sus scrofa	Sus scrofa
9913	periphery	Bos taurus	Bos taurus
9986	periphery	Oryctolagus cuniculus	Oryctolagus cuniculus
10090	core	Mus musculus	Mus musculus
10116	periphery	Rattus norvegicus	Rattus norvegicus
10141	periphery	Cavia porcellus	Cavia porcellus
10228	periphery	Trichoplax adhaerens	Trichoplax adhaerens
13616	core	Monodelphis domestica	Monodelphis domestica
15368	periphery	Brachypodium distachyon	Brachypodium distachyon
28377	periphery	Anolis carolinensis	Anolis carolinensis
28985	core	Kluyveromyces lactis	Kluyveromyces lactis
29760	periphery	Vitis vinifera	Vitis vinifera
29883	periphery	Laccaria bicolor	Laccaria bicolor
31033	periphery	Takifugu rubripes	Takifugu rubripes
31234	periphery	Caenorhabditis remanei	Caenorhabditis remanei
31964	periphery	Clavibacter michiganensis SPDN	Clavibacter michiganensis sepedonicus
32049	periphery	Synechococcus sp. 7002	Synechococcus PCC 7002
32051	periphery	Synechococcus sp. WH7803	Synechococcus WH 7803
33169	periphery	Eremothecium gossypii	Eremothecium gossypii
33178	periphery	Aspergillus terreus	Aspergillus terreus
35128	core	Thalassiosira pseudonana	Thalassiosira pseudonana CCMP 1335
36630	core	Neosartorya fischeri	Neosartorya fischeri
36870	core	Wigglesworthia glossinidia	Wigglesworthia brevipalpis
36914	periphery	Lodderomyces elongisporus	Lodderomyces elongisporus
37692	periphery	Phytoplasma mali	Candidatus Phytoplasma mali
39946	periphery	Oryza sativa Indica	Oryza indica
39947	core	Oryza sativa Japonica	Oryza sativa
41431	periphery	Cyanothece sp. 8801	Cyanothece PCC 8801
41514	periphery	Salmonella enterica Arizonae	Salmonella enterica arizonae serovar 62 z4 z23  
43989	core	Cyanothece sp. 51142	Cyanothece ATCC 51142
44689	core	Dictyostelium discoideum	Dictyostelium discoideum
45351	periphery	Nematostella vectensis	Nematostella vectensis
45361	periphery	Mycoplasma conjunctivae	Mycoplasma conjunctivae
51453	periphery	Hypocrea jecorina	Trichoderma reesei
51511	periphery	Ciona savignyi	Ciona savignyi
56780	core	Syntrophus aciditrophicus	Syntrophus aciditrophicus SB
59374	core	Fibrobacter succinogenes	Fibrobacter succinogenes S85
59689	periphery	Arabidopsis lyrata	Arabidopsis lyrata
59729	periphery	Taeniopygia guttata	Taeniopygia guttata
59748	periphery	Phytoplasma australiense	Candidatus Phytoplasma australiense
59919	periphery	Prochlorococcus marinus CCMP1986	Prochlorococcus marinus MED4
59920	periphery	Prochlorococcus marinus NATL2A	Prochlorococcus marinus NATL2A
59922	periphery	Prochlorococcus marinus MIT9303	Prochlorococcus marinus MIT 9303
60480	periphery	Shewanella sp. MR4	Shewanella MR-4
60481	periphery	Shewanella sp. MR7	Shewanella MR-7
62928	periphery	Azoarcus sp. BH72	Azoarcus BH72
62977	core	Acinetobacter sp. ADP1	Acinetobacter sp ADP1
63737	periphery	Nostoc punctiforme	Nostoc punctiforme PCC 73102
64091	core	Halobacterium sp. NRC1	Halobacterium sp
64471	periphery	Synechococcus sp. CC9311	Synechococcus CC9311
65393	periphery	Cyanothece sp. 7424	Cyanothece PCC 7424
66084	periphery	Wolbachia sp. wRi	Wolbachia wRi
66692	periphery	Bacillus clausii	Bacillus clausii KSM-K16
67593	periphery	Phytophthora sojae	Phytophthora sojae
69014	core	Thermococcus kodakarensis	Thermococcus kodakaraensis KOD1
69293	core	Gasterosteus aculeatus	Gasterosteus aculeatus
70448	core	Ostreococcus tauri	Ostreococcus tauri
70601	core	Pyrococcus horikoshii	Pyrococcus horikoshii
71421	core	Haemophilus influenzae KW20	Haemophilus influenzae
73239	periphery	Plasmodium yoelii	Plasmodium yoelii yoelii
74546	periphery	Prochlorococcus marinus MIT9312	Prochlorococcus marinus MIT 9312
74547	core	Prochlorococcus marinus MIT9313	Prochlorococcus marinus MIT9313
76114	core	Aromatoleum aromaticum	Aromatoleum aromaticum EbN1
76869	periphery	Pseudomonas putida GB1	Pseudomonas putida GB 1
78245	core	Xanthobacter autotrophicus	Xanthobacter autotrophicus Py2
81824	periphery	Monosiga brevicollis	Monosiga brevicollis
83331	periphery	Mycobacterium tuberculosis CDC1551	Mycobacterium tuberculosis CDC1551
83332	core	Mycobacterium tuberculosis H37Rv	Mycobacterium tuberculosis H37Rv
84588	core	Synechococcus sp. WH8102	Synechococcus sp WH8102
85643	core	Thauera sp. MZ1T	Thauera MZ1T
85962	core	Helicobacter pylori 26695	Helicobacter pylori 26695
85963	periphery	Helicobacter pylori J99	Helicobacter pylori J99
93059	periphery	Prochlorococcus marinus MIT9211	Prochlorococcus marinus MIT 9211
93060	periphery	Prochlorococcus marinus MIT9215	Prochlorococcus marinus MIT 9215
93061	periphery	Staphylococcus aureus 8325	Staphylococcus aureus NCTC 8325
93062	periphery	Staphylococcus aureus COL	Staphylococcus aureus COL
94122	periphery	Shewanella sp. ANA3	Shewanella ANA-3
96561	core	Desulfococcus oleovorans	Candidatus Desulfococcus oleovorans Hxd3
99287	periphery	Salmonella enterica LT2	Salmonella typhimurium LT2
99883	periphery	Tetraodon nigroviridis	Tetraodon nigroviridis
100226	core	Streptomyces coelicolor	Streptomyces coelicolor
101510	core	Rhodococcus jostii	Rhodococcus jostii RHA1
103690	core	Nostoc sp. PCC7120	Nostoc sp
104341	periphery	Postia placenta	Postia placenta MAD 698
106370	core	Frankia sp. CcI3	Frankia CcI3
107806	core	Buchnera aphidicola ApAPS	Buchnera sp
110662	periphery	Synechococcus sp. CC9605	Synechococcus CC9605
114615	periphery	Bradyrhizobium sp. ORS278	Bradyrhizobium ORS278
115711	periphery	Chlamydophila pneumoniae AR39	Chlamydophila pneumoniae AR39
115713	core	Chlamydophila pneumoniae CWL029	Chlamydophila pneumoniae CWL029
119857	periphery	Francisella tularensis holarctica	Francisella tularensis holarctica
121224	core	Pediculus humanus	Pediculus humanus corporis
122586	core	Neisseria meningitidis MC58	Neisseria meningitidis MC58
122587	periphery	Neisseria meningitidis Z2491	Neisseria meningitidis Z2491
123214	core	Persephonella marina	Persephonella marina EX H1
126740	periphery	Thermotoga sp. RQ2	Thermotoga RQ2
135651	periphery	Caenorhabditis brenneri	Caenorhabditis brenneri
138119	core	Desulfitobacterium hafniense Y51	Desulfitobacterium hafniense Y51
138677	periphery	Chlamydophila pneumoniae J138	Chlamydophila pneumoniae J138
146891	periphery	Prochlorococcus marinus AS9601	Prochlorococcus marinus AS9601
148305	core	Magnaporthe grisea	Magnaporthe grisea
150340	periphery	Vibrio sp. Ex25	Vibrio Ex25
155864	periphery	Escherichia coli EDL933	Escherichia coli O157H7 EDL933
156889	core	Magnetococcus sp. MC1	Magnetococcus MC-1
158878	core	Staphylococcus aureus Mu50	Staphylococcus aureus Mu50
158879	periphery	Staphylococcus aureus N315	Staphylococcus aureus N315
159087	core	Dechloromonas aromatica	Dechloromonas aromatica RCB
160488	periphery	Pseudomonas putida KT2440	Pseudomonas putida KT2440
160490	periphery	Streptococcus pyogenes M1GAS	Streptococcus pyogenes M1 GAS
160491	periphery	Streptococcus pyogenes Manfredo	Streptococcus pyogenes Manfredo
160492	core	Xylella fastidiosa 9a5c	Xylella fastidiosa
162425	periphery	Emericella nidulans	Aspergillus nidulans
163164	core	Wolbachia sp. Dm	Wolbachia endosymbiont of Drosophila melanogaster
164328	periphery	Phytophthora ramorum	Phytophthora ramorum
164546	core	Cupriavidus taiwanensis	Cupriavidus taiwanensis
164756	periphery	Mycobacterium sp. MCS	Mycobacterium MCS
164757	periphery	Mycobacterium sp. JLS	Mycobacterium JLS
167539	periphery	Prochlorococcus marinus CCMP1375	Prochlorococcus marinus CCMP1375
167542	periphery	Prochlorococcus marinus MIT9515	Prochlorococcus marinus MIT 9515
167546	periphery	Prochlorococcus marinus MIT9301	Prochlorococcus marinus MIT 9301
167555	periphery	Prochlorococcus marinus NATL1A	Prochlorococcus marinus NATL1A
167879	core	Colwellia psychrerythraea	Colwellia psychrerythraea 34H
169292	periphery	Corynebacterium aurimucosum	Corynebacterium aurimucosum ATCC 700975
169963	periphery	Listeria monocytogenes EGD	Listeria monocytogenes
170187	core	Streptococcus pneumoniae TIGR4	Streptococcus pneumoniae TIGR4
171101	periphery	Streptococcus pneumoniae R6	Streptococcus pneumoniae R6
176279	periphery	Staphylococcus epidermidis RP62A	Staphylococcus epidermidis RP62A
176280	periphery	Staphylococcus epidermidis 12228	Staphylococcus epidermidis ATCC 12228
176299	core	Agrobacterium tumefaciens	Agrobacterium tumefaciens C58 Cereon
177416	core	Francisella tularensis SCHUS4	Francisella tularensis tularensis
177437	core	Desulfobacterium autotrophicum	Desulfobacterium autotrophicum HRM2
177439	core	Desulfotalea psychrophila	Desulfotalea psychrophila LSv54
178306	core	Pyrobaculum aerophilum	Pyrobaculum aerophilum
182082	periphery	Chlamydophila pneumoniae TW183	Chlamydophila pneumoniae TW 183
183190	periphery	Xylella fastidiosa Temecula1	Xylella fastidiosa Temecula1
186103	periphery	Streptococcus pyogenes MGAS8232	Streptococcus pyogenes MGAS8232
186497	periphery	Pyrococcus furiosus	Pyrococcus furiosus
187272	core	Alkalilimnicola ehrlichii	Alkalilimnicola ehrlichei MLHE-1
187410	periphery	Yersinia pestis KIM10	Yersinia pestis KIM 10
187420	core	Methanothermobacter thermautotr.	Methanobacterium thermoautotrophicum
188937	periphery	Methanosarcina acetivorans	Methanosarcina acetivorans
189518	core	Leptospira interrogans 56601	Leptospira interrogans serovar Lai
189918	periphery	Mycobacterium sp. KMS	Mycobacterium KMS
190192	core	Methanopyrus kandleri	Methanopyrus kandleri
190304	core	Fusobacterium nucleatum	Fusobacterium nucleatum
190485	core	Xanthomonas campestris 33913	Xanthomonas campestris ATCC 33913
190486	periphery	Xanthomonas axonopodis 306	Xanthomonas citri
190650	core	Caulobacter crescentus CB15	Caulobacter crescentus
192222	core	Campylobacter jejuni 11168	Campylobacter jejuni
192952	core	Methanosarcina mazei	Methanosarcina mazei
193567	periphery	Streptococcus pyogenes SSI1	Streptococcus pyogenes SSI-1
194439	core	Chlorobium tepidum	Chlorobium tepidum TLS
195099	periphery	Campylobacter jejuni RM1221	Campylobacter jejuni RM1221
195102	periphery	Clostridium perfringens 13	Clostridium perfringens
195103	periphery	Clostridium perfringens 13124	Clostridium perfringens ATCC 13124
196162	core	Nocardioides sp. JS614	Nocardioides JS614
196164	core	Corynebacterium efficiens	Corynebacterium efficiens YS-314
196600	periphery	Vibrio vulnificus YJ016	Vibrio vulnificus YJ016
196620	periphery	Staphylococcus aureus MW2	Staphylococcus aureus MW2
196627	periphery	Corynebacterium glutamicum 13032	Corynebacterium glutamicum ATCC 13032 Bielefeld
197221	core	Thermosynechococcus elongatus	Thermosynechococcus elongatus
198094	periphery	Bacillus anthracis Ames	Bacillus anthracis Ames
198214	core	Shigella flexneri 301	Shigella flexneri 2a
198215	periphery	Shigella flexneri 2457T	Shigella flexneri 2a 2457T
198466	periphery	Streptococcus pyogenes MGAS315	Streptococcus pyogenes MGAS315
198804	periphery	Buchnera aphidicola Sg	Buchnera aphidicola Sg
199310	periphery	Escherichia coli CFT073	Escherichia coli CFT073
203119	periphery	Clostridium thermocellum	Clostridium thermocellum ATCC 27405
203120	core	Leuconostoc mesenteroides	Leuconostoc mesenteroides ATCC 8293
203122	core	Saccharophagus degradans	Saccharophagus degradans 2-40
203123	core	Oenococcus oeni	Oenococcus oeni PSU-1
203124	core	Trichodesmium erythraeum IMS101	Trichodesmium erythraeum IMS101
203267	core	Tropheryma whipplei Twist	Tropheryma whipplei Twist
203907	core	Blochmannia floridanus	Candidatus Blochmannia floridanus
204536	periphery	Sulfurihydrogenibium azorense	Sulfurihydrogenibium azorense Az Fu1
204669	core	Koribacter versatilis	Candidatus Koribacter versatilis Ellin345
204722	periphery	Brucella suis 1330	Brucella suis 1330
204773	core	Herminiimonas arsenicoxydans	Herminiimonas arsenicoxydans
205913	periphery	Bifidobacterium longum DJO10A	Bifidobacterium longum DJO10A
205914	periphery	Haemophilus somnus 129PT	Haemophilus somnus 129PT
205918	periphery	Pseudomonas syringae B728a	Pseudomonas syringae pv B728a
205920	periphery	Ehrlichia chaffeensis	Ehrlichia chaffeensis Arkansas
205921	periphery	Streptococcus agalactiae A909	Streptococcus agalactiae A909
205922	periphery	Pseudomonas fluorescens Pf01	Pseudomonas fluorescens Pf0 1
206672	core	Bifidobacterium longum NCC2705	Bifidobacterium longum
207559	periphery	Desulfovibrio desulfuricans G20	Desulfovibrio desulfuricans G20
208435	periphery	Streptococcus agalactiae 2603V/R	Streptococcus agalactiae 2603
208963	periphery	Pseudomonas aeruginosa PA14	Pseudomonas aeruginosa UCBPP-PA14
208964	core	Pseudomonas aeruginosa PAO1	Pseudomonas aeruginosa
209261	periphery	Salmonella enterica Ty2	Salmonella enterica serovar Typhi Ty2
210007	periphery	Streptococcus mutans	Streptococcus mutans
211110	periphery	Streptococcus agalactiae NEM316	Streptococcus agalactiae NEM316
211586	core	Shewanella oneidensis MR1	Shewanella oneidensis
212042	periphery	Anaplasma phagocytophilum	Anaplasma phagocytophilum HZ
212717	periphery	Clostridium tetani	Clostridium tetani E88
214092	core	Yersinia pestis CO92	Yersinia pestis CO92
214684	periphery	Cryptococcus neoformans	Cryptococcus neoformans var JEC21
216389	periphery	Dehalococcoides sp. BAV1	Dehalococcoides BAV1
216591	periphery	Burkholderia cenocepacia J2315	Burkholderia cenocepacia J2315
216594	periphery	Mycobacterium marinum	Mycobacterium marinum M
216595	periphery	Pseudomonas fluorescens SBW25	Pseudomonas fluorescens SBW25
216596	periphery	Rhizobium leguminosarum 3841	Rhizobium leguminosarum bv viciae 3841
216895	periphery	Vibrio vulnificus CMCP6	Vibrio vulnificus CMCP6
218491	core	Pectobacterium atrosepticum	Erwinia carotovora atroseptica SCRI1043
218494	periphery	Streptococcus suis P17	Streptococcus suis P1 7
218495	periphery	Streptococcus uberis	Streptococcus uberis 0140J
218496	periphery	Tropheryma whipplei TW0827	Tropheryma whipplei TW08 27
218497	periphery	Chlamydophila abortus	Chlamydophila abortus S26 3
220341	core	Salmonella enterica CT18	Salmonella typhi
220664	periphery	Pseudomonas fluorescens Pf5	Pseudomonas fluorescens Pf-5
220668	core	Lactobacillus plantarum WCFS1	Lactobacillus plantarum
221109	core	Oceanobacillus iheyensis	Oceanobacillus iheyensis
221988	core	Mannheimia succiniciproducens	Mannheimia succiniciproducens MBEL55E
222523	periphery	Bacillus cereus 10987	Bacillus cereus ATCC 10987
222891	core	Neorickettsia sennetsu	Neorickettsia sennetsu Miyayama
222929	periphery	Coccidioides posadasii	Coccidioides posadasii
223283	periphery	Pseudomonas syringae DC3000	Pseudomonas syringae tomato DC3000
223926	periphery	Vibrio parahaemolyticus	Vibrio parahaemolyticus
224308	core	Bacillus subtilis	Bacillus subtilis
224324	core	Aquifex aeolicus	Aquifex aeolicus
224325	core	Archaeoglobus fulgidus	Archaeoglobus fulgidus
224326	core	Borrelia burgdorferi B31	Borrelia burgdorferi
224911	core	Bradyrhizobium japonicum	Bradyrhizobium japonicum
224914	core	Brucella melitensis 16M	Brucella melitensis
224915	periphery	Buchnera aphidicola Bp	Buchnera aphidicola
225849	periphery	Shewanella piezotolerans	Shewanella piezotolerans WP3
226185	core	Enterococcus faecalis	Enterococcus faecalis V583
226186	core	Bacteroides thetaiotaomicron	Bacteroides thetaiotaomicron VPI-5482
226900	periphery	Bacillus cereus 14579	Bacillus cereus ATCC14579
227377	core	Coxiella burnetii 493	Coxiella burnetii
227882	periphery	Streptomyces avermitilis	Streptomyces avermitilis
227941	periphery	Chlamydophila caviae	Chlamydophila caviae
228400	periphery	Haemophilus somnus 2336	Haemophilus somnus 2336
228405	core	Hyphomonas neptunium	Hyphomonas neptunium ATCC 15444
228410	core	Nitrosomonas europaea	Nitrosomonas europaea
228908	core	Nanoarchaeum equitans	Nanoarchaeum equitans
229193	periphery	Yersinia pestis Microtus	Yersinia pestis biovar Microtus 91001
232721	core	Acidovorax sp. JS42	Acidovorax JS42
233150	periphery	Mycoplasma gallisepticum	Mycoplasma gallisepticum
233412	periphery	Haemophilus ducreyi	Haemophilus ducreyi 35000HP
233413	periphery	Mycobacterium bovis AF2122	Mycobacterium bovis
234267	core	Solibacter usitatus	Solibacter usitatus Ellin6076
234621	periphery	Rhodococcus erythropolis	Rhodococcus erythropolis PR4
234826	core	Anaplasma marginale Maries	Anaplasma marginale St Maries
235279	periphery	Helicobacter hepaticus	Helicobacter hepaticus
235909	core	Geobacillus kaustophilus	Geobacillus kaustophilus HTA426
237895	periphery	Cryptosporidium hominis	Cryptosporidium hominis
240015	core	Acidobacterium capsulatum	Acidobacterium capsulatum ATCC 51196
240292	core	Anabaena variabilis	Anabaena variabilis ATCC 29413
242231	periphery	Neisseria gonorrhoeae 1090	Neisseria gonorrhoeae FA 1090
242619	core	Porphyromonas gingivalis W83	Porphyromonas gingivalis W83
243090	core	Rhodopirellula baltica	Pirellula sp
243159	periphery	Acidithiobacillus ferrooxidans 23270	Acidithiobacillus ferrooxidans ATCC 23270
243160	periphery	Burkholderia mallei 3344	Burkholderia mallei ATCC 23344
243161	periphery	Chlamydia muridarum	Chlamydia muridarum
243164	core	Dehalococcoides ethenogenes	Dehalococcoides ethenogenes 195
243230	core	Deinococcus radiodurans	Deinococcus radiodurans
243231	core	Geobacter sulfurreducens	Geobacter sulfurreducens
243232	core	Methanocaldococcus jannaschii	Methanococcus jannaschii
243233	core	Methylococcus capsulatus	Methylococcus capsulatus Bath
243243	periphery	Mycobacterium avium 104	Mycobacterium avium 104
243265	core	Photorhabdus luminescens	Photorhabdus luminescens
243272	periphery	Mycoplasma arthritidis	Mycoplasma arthritidis 158L3 1
243273	core	Mycoplasma genitalium	Mycoplasma genitalium
243274	core	Thermotoga maritima	Thermotoga maritima
243275	periphery	Treponema denticola	Treponema denticola ATCC 35405
243276	core	Treponema pallidum Nichols	Treponema pallidum
243277	core	Vibrio cholerae N16961	Vibrio cholerae
243365	core	Chromobacterium violaceum	Chromobacterium violaceum
246194	core	Carboxydothermus hydrogenoformans	Carboxydothermus hydrogenoformans Z-2901
246195	core	Dichelobacter nodosus	Dichelobacter nodosus VCS1703A
246196	periphery	Mycobacterium smegmatis	Mycobacterium smegmatis MC2 155
246197	core	Myxococcus xanthus	Myxococcus xanthus DK 1622
246200	core	Ruegeria pomeroyi	Ruegeria pomeroyi DSS 3
247156	core	Nocardia farcinica	Nocardia farcinica IFM10152
251221	core	Gloeobacter violaceus	Gloeobacter violaceus
254945	core	Ehrlichia ruminantium UPSA	Ehrlichia ruminantium Welgevonden UPSA
255470	periphery	Dehalococcoides sp. CBDB1	Dehalococcoides CBDB1
257309	periphery	Corynebacterium diphtheriae	Corynebacterium diphtheriae
257310	core	Bordetella bronchiseptica	Bordetella bronchiseptica
257311	periphery	Bordetella parapertussis	Bordetella parapertussis
257313	periphery	Bordetella pertussis	Bordetella pertussis
257314	periphery	Lactobacillus johnsonii 533	Lactobacillus johnsonii NCC 533
257363	periphery	Rickettsia typhi	Rickettsia typhi wilmington
258594	core	Rhodopseudomonas palustris CGA9	Rhodopseudomonas palustris CGA009
259536	core	Psychrobacter arcticus	Psychrobacter arcticum 273-4
259564	core	Methanococcoides burtonii	Methanococcoides burtonii DSM 6242
260799	periphery	Bacillus anthracis Sterne	Bacillus anthracis str Sterne
261594	periphery	Bacillus anthracis AmesA	Bacillus anthracis Ames 0581
262316	periphery	Mycobacterium avium K10	Mycobacterium avium paratuberculosis
262543	core	Exiguobacterium sibiricum	Exiguobacterium sibiricum 255 15
262698	periphery	Brucella abortus 9941	Brucella abortus bv  1 9 941
262719	periphery	Mycoplasma hyopneumoniae J	Mycoplasma hyopneumoniae J
262722	periphery	Mycoplasma hyopneumoniae 7448	Mycoplasma hyopneumoniae 7448
262723	periphery	Mycoplasma synoviae	Mycoplasma synoviae 53
262724	core	Thermus thermophilus HB27	Thermus thermophilus HB27
262768	core	Phytoplasma sp. OYM	Onion yellows phytoplasma
263820	core	Picrophilus torridus	Picrophilus torridus DSM 9790
264198	periphery	Ralstonia eutropha JMP134	Ralstonia eutropha JMP134
264199	periphery	Streptococcus thermophilus 18311	Streptococcus thermophilus LMG 18311
264201	core	Protochlamydia amoebophila	Parachlamydia sp UWE25
264202	periphery	Chlamydophila felis	Chlamydophila felis Fe C-56
264203	core	Zymomonas mobilis ZM4	Zymomonas mobilis ZM4
264462	core	Bdellovibrio bacteriovorus	Bdellovibrio bacteriovorus
264730	periphery	Pseudomonas syringae 1448A	Pseudomonas syringae phaseolicola 1448A
264732	core	Moorella thermoacetica	Moorella thermoacetica ATCC 39073
265072	core	Methylobacillus flagellatus	Methylobacillus flagellatus KT
265311	core	Mesoplasma florum	Mesoplasma florum L1
265669	periphery	Listeria monocytogenes F2365	Listeria monocytogenes 4b F2365
266117	core	Rubrobacter xylanophilus	Rubrobacter xylanophilus DSM 9941
266264	periphery	Ralstonia metallidurans	Ralstonia metallidurans CH34
266265	periphery	Burkholderia xenovorans	Burkholderia xenovorans LB400
266779	periphery	Chelativorans sp. BNC1	Mesorhizobium BNC1
266834	core	Sinorhizobium meliloti	Sinorhizobium meliloti
266835	core	Mesorhizobium loti	Mesorhizobium loti
266940	core	Kineococcus radiotolerans	Kineococcus radiotolerans SRS30216
267377	core	Methanococcus maripaludis S2	Methanococcus maripaludis S2
267608	core	Ralstonia solanacearum	Ralstonia solanacearum
267671	periphery	Leptospira interrogans L1130	Leptospira interrogans serovar Copenhageni
267747	core	Propionibacterium acnes	Propionibacterium acnes KPA171202
267748	periphery	Mycoplasma mobile	Mycoplasma mobile 163K
269084	periphery	Synechococcus elongatus 6301	Synechococcus elongatus PCC 6301
269482	periphery	Burkholderia vietnamiensis	Burkholderia vietnamiensis G4
269483	periphery	Burkholderia sp. 383	Burkholderia 383
269484	periphery	Ehrlichia canis	Ehrlichia canis Jake
269796	core	Rhodospirillum rubrum	Rhodospirillum rubrum ATCC 11170
269797	periphery	Methanosarcina barkeri	Methanosarcina barkeri fusaro
269798	core	Cytophaga hutchinsonii	Cytophaga hutchinsonii ATCC 33406
269799	periphery	Geobacter metallireducens	Geobacter metallireducens GS-15
269800	core	Thermobifida fusca	Thermobifida fusca YX
271848	periphery	Burkholderia thailandensis	Burkholderia thailandensis E264
272557	core	Aeropyrum pernix	Aeropyrum pernix
272558	periphery	Bacillus halodurans	Bacillus halodurans
272559	periphery	Bacteroides fragilis 9343	Bacteroides fragilis NCTC 9434
272560	core	Burkholderia pseudomallei K96243	Burkholderia pseudomallei K96243
272561	core	Chlamydia trachomatis UW-3	Chlamydia trachomatis D UW 3 CX
272562	core	Clostridium acetobutylicum	Clostridium acetobutylicum
272563	periphery	Clostridium difficile 630	Clostridium difficile 630
272564	periphery	Desulfitobacterium hafniense DCB2	Desulfitobacterium hafniense DCB 2
272568	core	Gluconacetobacter diazotrophicus	Gluconacetobacter diazotrophicus PAl 5 FAPERJ
272569	core	Haloarcula marismortui	Haloarcula marismortui ATCC 43049
272620	core	Klebsiella pneumoniae 78578	Klebsiella pneumoniae MGH 78578
272621	periphery	Lactobacillus acidophilus	Lactobacillus acidophilus NCFM
272622	periphery	Lactococcus lactis SK11	Lactococcus lactis cremoris SK11
272623	core	Lactococcus lactis Il1403	Lactococcus lactis
272624	periphery	Legionella pneumophila Philadelphia	Legionella pneumophila Philadelphia 1
272626	core	Listeria innocua	Listeria innocua
272630	periphery	Methylobacterium extorquens AM1	Methylobacterium extorquens AM1
272631	periphery	Mycobacterium leprae TN	Mycobacterium leprae
272632	periphery	Mycoplasma mycoides	Mycoplasma mycoides
272633	periphery	Mycoplasma penetrans HF2	Mycoplasma penetrans
272634	periphery	Mycoplasma pneumoniae	Mycoplasma pneumoniae
272635	periphery	Mycoplasma pulmonis	Mycoplasma pulmonis
272831	periphery	Neisseria meningitidis FAM18	Neisseria meningitidis FAM18
272843	core	Pasteurella multocida	Pasteurella multocida
272844	periphery	Pyrococcus abyssi	Pyrococcus abyssi
272943	core	Rhodobacter sphaeroides 241	Rhodobacter sphaeroides 2 4 1
272944	periphery	Rickettsia conorii	Rickettsia conorii
272947	core	Rickettsia prowazekii	Rickettsia prowazekii
272994	periphery	Salmonella enterica SPB7	Salmonella enterica serovar Paratyphi B SPB7
273036	periphery	Staphylococcus aureus RF122	Staphylococcus aureus RF122
273057	core	Sulfolobus solfataricus	Sulfolobus solfataricus
273063	periphery	Sulfolobus tokodaii	Sulfolobus tokodaii
273068	core	Thermoanaerobacter tengcongensis	Thermoanaerobacter tengcongensis
273075	core	Thermoplasma acidophilum	Thermoplasma acidophilum
273116	periphery	Thermoplasma volcanium	Thermoplasma volcanium
273119	core	Ureaplasma parvum 700970	Ureaplasma urealyticum
273121	core	Wolinella succinogenes	Wolinella succinogenes
273123	periphery	Yersinia pseudotuberculosis 32953	Yersinia pseudotuberculosis IP32953
278197	core	Pediococcus pentosaceus	Pediococcus pentosaceus ATCC 25745
279010	periphery	Bacillus licheniformis 14580	Bacillus licheniformis ATCC 14580
279238	core	Novosphingobium aromaticivorans	Novosphingobium aromaticivorans DSM 12444
279808	periphery	Staphylococcus haemolyticus	Staphylococcus haemolyticus
281090	core	Leifsonia xyli	Leifsonia xyli xyli CTCB0
281309	periphery	Bacillus thuringiensis Konkukian	Bacillus thuringiensis konkukian
281310	periphery	Haemophilus influenzae 028NP	Haemophilus influenzae 86 028NP
281687	periphery	Caenorhabditis japonica	Caenorhabditis japonica
282458	periphery	Staphylococcus aureus MRSA252	Staphylococcus aureus aureus MRSA252
282459	periphery	Staphylococcus aureus MSSA476	Staphylococcus aureus aureus MSSA476
283165	periphery	Bartonella quintana	Bartonella quintana Toulouse
283166	core	Bartonella henselae	Bartonella henselae Houston-1
283942	core	Idiomarina loihiensis	Idiomarina loihiensis L2TR
286636	periphery	Streptococcus pyogenes MGAS10394	Streptococcus pyogenes MGAS10394
288000	periphery	Bradyrhizobium sp. BTAi1	Bradyrhizobium BTAi1
288681	periphery	Bacillus cereus E33L	Bacillus cereus ZK
288705	core	Renibacterium salmoninarum	Renibacterium salmoninarum ATCC 33209
289376	core	Thermodesulfovibrio yellowstonii	Thermodesulfovibrio yellowstonii DSM 11347
289380	periphery	Clostridium perfringens SM101	Clostridium perfringens SM101
290315	periphery	Chlorobium limicola	Chlorobium limicola DSM 245
290317	periphery	Chlorobium phaeobacteroides 266	Chlorobium phaeobacteroides DSM 266
290318	core	Chlorobium phaeovibrioides	Prosthecochloris vibrioformis DSM 265
290338	core	Citrobacter koseri	Citrobacter koseri ATCC BAA-895
290339	core	Cronobacter sakazakii	Enterobacter sakazakii ATCC BAA-894
290340	core	Arthrobacter aurescens	Arthrobacter aurescens TC1
290397	core	Anaeromyxobacter dehalogenans 2CPC	Anaeromyxobacter dehalogenans 2CP-C
290398	core	Chromohalobacter salexigens	Chromohalobacter salexigens DSM 3043
290399	periphery	Arthrobacter sp. FB24	Arthrobacter FB24
290400	core	Jannaschia sp. CCS1	Jannaschia CCS1
290402	periphery	Clostridium beijerinckii	Clostridium beijerinckii NCIMB 8052
290434	periphery	Borrelia garinii	Borrelia garinii PBi
290512	periphery	Prosthecochloris aestuarii	Prosthecochloris aestuarii DSM 271
290633	core	Gluconobacter oxydans	Gluconobacter oxydans 621H
291112	periphery	Photorhabdus asymbiotica	Photorhabdus asymbiotica
291272	periphery	Blochmannia pennsylvanicus	Candidatus Blochmannia pennsylvanicus BPEN
291331	periphery	Xanthomonas oryzae 10331	Xanthomonas oryzae KACC10331
292414	periphery	Ruegeria sp. TM1040	Silicibacter TM1040
292415	core	Thiobacillus denitrificans	Thiobacillus denitrificans ATCC 25259
292459	core	Symbiobacterium thermophilum	Symbiobacterium thermophilum IAM14863
292805	periphery	Wolbachia sp. Bm	Wolbachia endosymbiont of Brugia malayi TRS
293613	periphery	Rickettsia canadensis	Rickettsia canadensis McKiel
293614	periphery	Rickettsia akari	Rickettsia akari Hartford
293653	periphery	Streptococcus pyogenes MGAS5005	Streptococcus pyogenes MGAS5005
293826	core	Alkaliphilus metalliredigens	Alkaliphilus metalliredigens QYMF
294381	core	Entamoeba histolytica	Entamoeba histolytica HM-1:IMSS
295319	periphery	Salmonella enterica Paratyphi	Salmonella enterica Paratypi ATCC 9150
295358	periphery	Mycoplasma hyopneumoniae 232	Mycoplasma hyopneumoniae 232
295405	periphery	Bacteroides fragilis YCH46	Bacteroides fragilis YCH46
296591	core	Polaromonas sp. JS666	Polaromonas JS666
297245	periphery	Legionella pneumophila Lens	Legionella pneumophila Lens
297246	core	Legionella pneumophila Paris	Legionella pneumophila Paris
298386	core	Photobacterium profundum	Photobacterium profundum SS9
298653	periphery	Frankia sp. EAN1pec	Frankia EAN1pec
299768	periphery	Streptococcus thermophilus Z1066	Streptococcus thermophilus CNRZ1066
300267	periphery	Shigella dysenteriae	Shigella dysenteriae
300268	periphery	Shigella boydii Sb227	Shigella boydii Sb227
300269	periphery	Shigella sonnei	Shigella sonnei Ss046
300852	periphery	Thermus thermophilus HB8	Thermus thermophilus HB8
302409	periphery	Ehrlichia ruminantium Gardel	Ehrlichia ruminantium Gardel
304371	core	Methanocella paludicola	Methanocella paludicola SANAE
306263	periphery	Campylobacter lari RM2100	Campylobacter lari RM2100
306537	periphery	Corynebacterium jeikeium	Corynebacterium jeikeium K411
309798	core	Coprothermobacter proteolyticus	Coprothermobacter proteolyticus DSM 5265
309799	core	Dictyoglomus thermophilum	Dictyoglomus thermophilum H 6 12
309801	core	Thermomicrobium roseum	Thermomicrobium roseum DSM 5159
309803	periphery	Thermotoga neapolitana	Thermotoga neapolitana DSM 4359
309807	core	Salinibacter ruber	Salinibacter ruber DSM 13855
311402	periphery	Agrobacterium vitis	Agrobacterium vitis S4
311403	periphery	Agrobacterium radiobacter	Agrobacterium radiobacter K84
311424	periphery	Dehalococcoides sp. VS	Dehalococcoides VS
312153	core	Polynucleobacter necessarius QLW	Polynucleobacter necessarius asymbioticus QLW P1DMWA 1
312309	periphery	Vibrio fischeri ES114	Vibrio fischeri ES114
313596	core	Robiginitalea biformata	Robiginitalea biformata HTCC2501
314225	core	Erythrobacter litoralis	Erythrobacter litoralis HTCC2594
314275	core	Alteromonas macleodii	Alteromonas macleodii  Deep ecotype 
314315	periphery	Lactobacillus sakei	Lactobacillus sakei 23K
314565	periphery	Xanthomonas campestris 8004	Xanthomonas campestris 8004
314723	periphery	Borrelia hermsii	Borrelia hermsii DAH
314724	periphery	Borrelia turicatae	Borrelia turicatae 91E135
315277	periphery	Chlamydia trachomatis HAR13	Chlamydia trachomatis A HAR-13
315456	periphery	Rickettsia felis	Rickettsia felis URRWXCal2
315730	periphery	Bacillus weihenstephanensis	Bacillus weihenstephanensis KBAB4
315749	periphery	Bacillus cereus 39198	Bacillus cereus cytotoxis NVH 391-98
315750	periphery	Bacillus pumilus	Bacillus pumilus SAFR-032
316055	periphery	Rhodopseudomonas palustris BisA53	Rhodopseudomonas palustris BisA53
316056	periphery	Rhodopseudomonas palustris BisB18	Rhodopseudomonas palustris BisB18
316057	periphery	Rhodopseudomonas palustris BisB5	Rhodopseudomonas palustris BisB5
316058	periphery	Rhodopseudomonas palustris HaA2	Rhodopseudomonas palustris HaA2
316067	periphery	Geobacter sp. FRC32	Geobacter FRC 32
316273	periphery	Xanthomonas campestris 8510	Xanthomonas campestris vesicatoria 85-10
316274	core	Herpetosiphon aurantiacus	Herpetosiphon aurantiacus ATCC 23779
316275	core	Aliivibrio salmonicida	Aliivibrio salmonicida LFI1238
316278	periphery	Synechococcus sp. RCC307	Synechococcus RCC307
316279	periphery	Synechococcus sp. CC9902	Synechococcus CC9902
316385	periphery	Escherichia coli K12_DH10B	Escherichia coli K 12 substr  DH10B
316407	periphery	Escherichia coli K12_W3110	Escherichia coli K 12 substr  W3110
317025	core	Thiomicrospira crunogena	Thiomicrospira crunogena XCL-2
317655	core	Sphingopyxis alaskensis	Sphingopyxis alaskensis RB2256
318161	periphery	Shewanella denitrificans	Shewanella denitrificans OS217
318167	periphery	Shewanella frigidimarina	Shewanella frigidimarina NCIMB 400
318586	core	Paracoccus denitrificans	Paracoccus denitrificans PD1222
319224	periphery	Shewanella putrefaciens	Shewanella putrefaciens CN-32
319225	periphery	Chlorobium luteolum	Chlorobium luteolum DSM 273
319701	periphery	Streptococcus pyogenes MGAS6180	Streptococcus pyogenes MGAS6180
319795	periphery	Deinococcus geothermalis	Deinococcus geothermalis DSM 11300
320372	periphery	Burkholderia pseudomallei 1710b	Burkholderia pseudomallei 1710b
320373	periphery	Burkholderia pseudomallei 668	Burkholderia pseudomallei 668
320388	periphery	Burkholderia mallei SAVP1	Burkholderia mallei SAVP1
320389	periphery	Burkholderia mallei 10247	Burkholderia mallei NCTC 10247
320483	periphery	Anaplasma marginale Florida	Anaplasma marginale Florida
321314	periphery	Salmonella enterica Choleraesuis	Salmonella enterica Choleraesuis
321327	periphery	Synechococcus sp. JA33	Cyanobacteria bacterium Yellowstone A-Prime
321332	periphery	Synechococcus sp. JA23	Cyanobacteria bacterium Yellowstone B-Prime
321956	periphery	Lactobacillus delbrueckii BAA365	Lactobacillus delbrueckii bulgaricus ATCC BAA-365
321967	periphery	Lactobacillus casei 334	Lactobacillus casei ATCC 334
322098	periphery	Phytoplasma asteris	Aster yellows witches-broom phytoplasma AYWB
322159	periphery	Streptococcus thermophilus LMD9	Streptococcus thermophilus LMD-9
322710	core	Azotobacter vinelandii	Azotobacter vinelandii DJ
323097	periphery	Nitrobacter hamburgensis	Nitrobacter hamburgensis X14
323098	core	Nitrobacter winogradskyi	Nitrobacter winogradskyi Nb-255
323259	core	Methanospirillum hungatei	Methanospirillum hungatei JF-1
323261	core	Nitrosococcus oceani	Nitrosococcus oceani ATCC 19707
323848	core	Nitrosospira multiformis	Nitrosospira multiformis ATCC 25196
323850	periphery	Shewanella loihica	Shewanella loihica PV-4
324057	core	Paenibacillus sp. JDR2	Paenibacillus JDR 2
324602	core	Chloroflexus aurantiacus	Chloroflexus aurantiacus J 10 fl
324831	periphery	Lactobacillus gasseri	Lactobacillus gasseri ATCC 33323
324925	core	Pelodictyon phaeoclathratiforme	Pelodictyon phaeoclathratiforme BU 1
325240	periphery	Shewanella baltica OS155	Shewanella baltica OS155
326297	periphery	Shewanella amazonensis	Shewanella amazonensis SB2B
326298	periphery	Sulfurimonas denitrificans	Thiomicrospira denitrificans ATCC 33889
326423	periphery	Bacillus amyloliquefaciens	Bacillus amyloliquefaciens FZB42
326424	periphery	Frankia alni	Frankia alni ACN14a
326427	periphery	Chloroflexus aggregans	Chloroflexus aggregans DSM 9485
326442	core	Pseudoalteromonas haloplanktis	Pseudoalteromonas haloplanktis TAC125
329726	core	Acaryochloris marina	Acaryochloris marina MBIC11017
330779	periphery	Sulfolobus acidocaldarius	Sulfolobus acidocaldarius DSM 639
331104	periphery	Blattabacterium sp. Bge	Blattabacterium  Blattella germanica  Bge
331111	periphery	Escherichia coli E24377A	Escherichia coli E24377A
331112	periphery	Escherichia coli HS	Escherichia coli HS
331271	periphery	Burkholderia cenocepacia 1054	Burkholderia cenocepacia AU 1054
331272	periphery	Burkholderia cenocepacia 2424	Burkholderia cenocepacia HI2424
331678	periphery	Chlorobium phaeobacteroides BS1	Chlorobium phaeobacteroides BS1
332648	periphery	Botryotinia fuckeliana	Botryotinia fuckeliana B05.10
334380	periphery	Orientia tsutsugamushi Ikeda	Orientia tsutsugamushi Ikeda
334390	periphery	Lactobacillus fermentum	Lactobacillus fermentum IFO 3956
334413	core	Finegoldia magna	Finegoldia magna ATCC 29328
335283	periphery	Nitrosomonas eutropha	Nitrosomonas eutropha C71
335284	periphery	Psychrobacter cryohalolentis	Psychrobacter cryohalolentis K5
335541	core	Syntrophomonas wolfei	Syntrophomonas wolfei Goettingen
335543	core	Syntrophobacter fumaroxidans	Syntrophobacter fumaroxidans MPOB
335992	core	Pelagibacter ubique	Candidatus Pelagibacter ubique HTCC1062
336407	periphery	Rickettsia bellii RML369	Rickettsia bellii RML369-C
336982	periphery	Mycobacterium tuberculosis F11	Mycobacterium tuberculosis F11
338187	periphery	Vibrio harveyi	Vibrio harveyi ATCC BAA-1116
338963	core	Pelobacter carbinolicus	Pelobacter carbinolicus
338966	periphery	Pelobacter propionicus	Pelobacter propionicus DSM 2379
338969	core	Rhodoferax ferrireducens	Rhodoferax ferrireducens T118
339670	periphery	Burkholderia ambifaria AMMD	Burkholderia cepacia AMMD
339671	periphery	Actinobacillus succinogenes	Actinobacillus succinogenes 130Z
339860	core	Methanosphaera stadtmanae	Methanosphaera stadtmanae
340047	periphery	Mycoplasma capricolum	Mycoplasma capricolum ATCC 27343
340099	periphery	Thermoanaerobacter pseudethanolicus	Thermoanaerobacter pseudethanolicus ATCC 33223
340100	periphery	Bordetella petrii	Bordetella petrii
340102	periphery	Pyrobaculum arsenaticum	Pyrobaculum arsenaticum DSM 13514
340177	periphery	Chlorobium chlorochromatii	Chlorobium chlorochromatii CaD3
340322	periphery	Corynebacterium glutamicum R	Corynebacterium glutamicum R
342108	core	Magnetospirillum magneticum	Magnetospirillum magneticum AMB-1
342109	periphery	Xanthomonas oryzae 311018	Xanthomonas oryzae MAFF 311018
342451	periphery	Staphylococcus saprophyticus	Staphylococcus saprophyticus
342610	periphery	Pseudoalteromonas atlantica	Pseudoalteromonas atlantica T6c
343509	core	Sodalis glossinidius	Sodalis glossinidius morsitans
344609	periphery	Shigella boydii 3083	Shigella boydii CDC 3083 94
345073	periphery	Vibrio cholerae O395	Vibrio cholerae O395
347255	periphery	Rickettsia africae	Rickettsia africae ESF 5
347257	periphery	Mycoplasma agalactiae	Mycoplasma agalactiae PG2
347834	core	Rhizobium etli CFN42	Rhizobium etli CFN 42
348780	core	Natronomonas pharaonis	Natronomonas pharaonis
349101	periphery	Rhodobacter sphaeroides 17029	Rhodobacter sphaeroides ATCC 17029
349102	periphery	Rhodobacter sphaeroides 17025	Rhodobacter sphaeroides ATCC 17025
349106	periphery	Psychrobacter sp. PRwf	Psychrobacter PRwf-1
349124	core	Halorhodospira halophila	Halorhodospira halophila SL1
349161	core	Desulfotomaculum reducens	Desulfotomaculum reducens MI-1
349163	core	Acidiphilium cryptum	Acidiphilium cryptum JF-5
349307	core	Methanosaeta thermophila	Methanosaeta thermophila PT
349519	periphery	Leuconostoc citreum	Leuconostoc citreum KM20
349521	core	Hahella chejuensis	Hahella chejuensis KCTC 2396
349741	core	Akkermansia muciniphila	Akkermansia muciniphila ATCC BAA 835
349746	periphery	Yersinia pestis Angola	Yersinia pestis Angola
349747	periphery	Yersinia pseudotuberculosis 31758	Yersinia pseudotuberculosis IP 31758
350054	periphery	Mycobacterium gilvum PYR-GCK	Mycobacterium gilvum PYR-GCK
350058	periphery	Mycobacterium vanbaalenii	Mycobacterium vanbaalenii PYR-1
350688	periphery	Alkaliphilus oremlandii	Alkaliphilus oremlandii OhILAs
351160	core	Uncultured archaeon RC1	uncultured methanogenic archaeon RC-I
351348	core	Marinobacter aquaeolei	Marinobacter aquaeolei VT8
351605	periphery	Geobacter uraniireducens	Geobacter uraniumreducens Rf4
351607	core	Acidothermus cellulolyticus	Acidothermus cellulolyticus 11B
351627	core	Caldicellulosiruptor saccharolyticus	Caldicellulosiruptor saccharolyticus DSM 8903
351745	periphery	Shewanella sp. W3181	Shewanella W3-18-1
351746	periphery	Pseudomonas putida F1	Pseudomonas putida F1
354242	periphery	Campylobacter jejuni 81176	Campylobacter jejuni 81-176
355276	periphery	Leptospira borgpetersenii L550	Leptospira borgpetersenii serovar Hardjo-bovis L550
355277	periphery	Leptospira borgpetersenii JB197	Leptospira borgpetersenii serovar Hardjo-bovis JB197
355278	periphery	Leptospira biflexa Ames	Leptospira biflexa serovar Patoc  Patoc 1  Ames 
357244	core	Orientia tsutsugamushi Boryong	Orientia tsutsugamushi Boryong
357348	periphery	Burkholderia pseudomallei 1106a	Burkholderia pseudomallei 1106a
357544	periphery	Helicobacter pylori HPAG1	Helicobacter pylori HPAG1
357804	core	Psychromonas ingrahamii	Psychromonas ingrahamii 37
357808	periphery	Roseiflexus sp. RS1	Roseiflexus RS-1
357809	periphery	Clostridium phytofermentans	Clostridium phytofermentans ISDg
358681	core	Brevibacillus brevis 100599	Brevibacillus brevis NBRC 100599
359391	periphery	Brucella melitensis 2308	Brucella melitensis biovar Abortus
359786	periphery	Staphylococcus aureus JH9	Staphylococcus aureus JH9
359787	periphery	Staphylococcus aureus JH1	Staphylococcus aureus JH1
360094	periphery	Xanthomonas oryzae PXO99A	Xanthomonas oryzae PXO99A
360095	periphery	Bartonella bacilliformis KC583	Bartonella bacilliformis KC583
360102	periphery	Yersinia pestis Antiqua	Yersinia pestis Antiqua
360104	periphery	Campylobacter concisus	Campylobacter concisus 13826
360105	periphery	Campylobacter curvus	Campylobacter curvus 525 92
360106	periphery	Campylobacter fetus	Campylobacter fetus 82-40
360107	periphery	Campylobacter hominis	Campylobacter hominis ATCC BAA-381
360109	periphery	Campylobacter jejuni 26997	Campylobacter jejuni doylei 269 97
360115	periphery	Coxiella burnetii 331	Coxiella burnetii RSA 331
360910	periphery	Bordetella avium	Bordetella avium 197N
360911	periphery	Exiguobacterium sp. AT1b	Exiguobacterium AT1b
361100	periphery	Bacillus cereus Q1	Bacillus cereus Q1
362242	periphery	Mycobacterium ulcerans	Mycobacterium ulcerans Agy99
362663	periphery	Escherichia coli 536	Escherichia coli 536
362948	periphery	Lactobacillus salivarius	Lactobacillus salivarius UCC118
362976	core	Haloquadratum walsbyi	Haloquadratum walsbyi
363253	core	Lawsonia intracellularis	Lawsonia intracellularis PHE MN1-00
364106	periphery	Escherichia coli UTI89	Escherichia coli UTI89
365044	periphery	Polaromonas naphthalenivorans	Polaromonas naphthalenivorans CJ2
366394	periphery	Sinorhizobium medicae	Sinorhizobium medicae WSM419
366602	periphery	Caulobacter sp. K31	Caulobacter K31
367737	core	Arcobacter butzleri	Arcobacter butzleri RM4018
367928	periphery	Bifidobacterium adolescentis	Bifidobacterium adolescentis ATCC 15703
368407	core	Methanoculleus marisnigri	Methanoculleus marisnigri JR1
368408	core	Thermofilum pendens	Thermofilum pendens Hrk 5
369723	core	Salinispora tropica	Salinispora tropica CNB-440
370438	core	Pelotomaculum thermopropionicum	Pelotomaculum thermopropionicum SI
370551	periphery	Streptococcus pyogenes MGAS9429	Streptococcus pyogenes MGAS9429
370552	periphery	Streptococcus pyogenes MGAS10270	Streptococcus pyogenes MGAS10270
370553	periphery	Streptococcus pyogenes MGAS2096	Streptococcus pyogenes MGAS2096
370554	periphery	Streptococcus pyogenes MGAS10750	Streptococcus pyogenes MGAS10750
372461	periphery	Buchnera aphidicola Cc	Buchnera aphidicola Cc Cinara cedri
373153	periphery	Streptococcus pneumoniae D39	Streptococcus pneumoniae D39
373384	periphery	Shigella flexneri 8401	Shigella flexneri 5 8401
373903	core	Halothermothrix orenii	Halothermothrix orenii H 168
374463	core	Baumannia cicadellinicola	Baumannia cicadellinicola Homalodisca coagulata
374833	periphery	Neisseria meningitidis 053442	Neisseria meningitidis 053442
374847	core	Korarchaeum cryptofilum	Candidatus Korarchaeum cryptofilum OPF8
374930	periphery	Haemophilus influenzae PittEE	Haemophilus influenzae PittEE
374931	periphery	Haemophilus influenzae PittGG	Haemophilus influenzae PittGG
375286	core	Janthinobacterium sp. Marseille	Janthinobacterium Marseille
375451	core	Roseobacter denitrificans	Roseobacter denitrificans OCh 114
376686	core	Flavobacterium johnsoniae	Flavobacterium johnsoniae UW101
377628	periphery	Yersinia pestis Nepal516	Yersinia pestis Nepal516
377629	core	Teredinibacter turnerae	Teredinibacter turnerae T7901
378753	core	Kocuria rhizophila DC2201	Kocuria rhizophila DC2201
379066	core	Gemmatimonas aurantiaca	Gemmatimonas aurantiaca T 27
379731	periphery	Pseudomonas stutzeri	Pseudomonas stutzeri A1501
380394	core	Acidithiobacillus ferrooxidans 53993	Acidithiobacillus ferrooxidans ATCC 53993
380703	core	Aeromonas hydrophila	Aeromonas hydrophila ATCC 7966
380749	core	Hydrogenobaculum sp. Y04AAS1	Hydrogenobaculum Y04AAS1
381666	periphery	Ralstonia eutropha H16	Ralstonia eutropha H16
381754	periphery	Pseudomonas aeruginosa PA7	Pseudomonas aeruginosa PA7
381764	core	Fervidobacterium nodosum	Fervidobacterium nodosum Rt17-B1
382245	periphery	Aeromonas salmonicida	Aeromonas salmonicida A449
382638	periphery	Helicobacter acinonychis	Helicobacter acinonychis Sheeba
382640	periphery	Bartonella tribocorum	Bartonella tribocorum CIP 105476
383372	core	Roseiflexus castenholzii	Roseiflexus castenholzii DSM 13941
384616	periphery	Pyrobaculum islandicum	Pyrobaculum islandicum DSM 4184
384676	periphery	Pseudomonas entomophila	Pseudomonas entomophila L48
386043	periphery	Listeria welshimeri	Listeria welshimeri serovar 6b SLCC5334
386415	periphery	Clostridium novyi	Clostridium novyi NT
386585	periphery	Escherichia coli Sakai	Escherichia coli O157H7
386656	periphery	Yersinia pestis Pestoides	Yersinia pestis Pestoides F
387092	core	Nitratiruptor sp. SB155	Nitratiruptor SB155-2
387093	core	Sulfurovum sp. NBC371	Sulfurovum NBC37-1
387344	periphery	Lactobacillus brevis	Lactobacillus brevis ATCC 367
387662	core	Carsonella ruddii	Candidatus Carsonella ruddii PV
388396	periphery	Vibrio fischeri MJ11	Vibrio fischeri MJ11
388919	periphery	Streptococcus sanguinis	Streptococcus sanguinis SK36
390235	periphery	Pseudomonas putida W619	Pseudomonas putida W619
390236	periphery	Borrelia afzelii	Borrelia afzelii PKo
390333	periphery	Lactobacillus delbrueckii 11842	Lactobacillus delbrueckii bulgaricus
390874	periphery	Thermotoga petrophila	Thermotoga petrophila RKU-1
391008	periphery	Stenotrophomonas maltophilia R551	Stenotrophomonas maltophilia R551 3
391009	core	Thermosipho melanesiensis	Thermosipho melanesiensis BI429
391037	periphery	Salinispora arenicola	Salinispora arenicola CNS-205
391038	periphery	Burkholderia phymatum STM815	Burkholderia phymatum STM815
391165	core	Granulibacter bethesdensis	Granulobacter bethesdensis CGDNIH1
391295	periphery	Streptococcus suis 05ZYH33	Streptococcus suis 05ZYH33
391296	periphery	Streptococcus suis 98HAH33	Streptococcus suis 98HAH33
391735	core	Verminephrobacter eiseniae	Verminephrobacter eiseniae EF01-2
391774	periphery	Desulfovibrio vulgaris DP4	Desulfovibrio vulgaris DP4
391896	periphery	Rickettsia bellii 85389	Rickettsia bellii OSU 85-389
391904	periphery	Bifidobacterium longum 15697	Bifidobacterium longum infantis ATCC 15697
392021	periphery	Rickettsia rickettsii Smith	Rickettsia rickettsii Sheila Smith
392499	core	Sphingomonas wittichii	Sphingomonas wittichii RW1
392500	periphery	Shewanella woodyi	Shewanella woodyi ATCC 51908
393011	periphery	Francisella tularensis OSU18	Francisella tularensis holarctica OSU18
393115	periphery	Francisella tularensis FSC198	Francisella tularensis FSC 198
393305	periphery	Yersinia enterocolitica	Yersinia enterocolitica 8081
393595	core	Alcanivorax borkumensis	Alcanivorax borkumensis SK2
394221	core	Maricaulis maris	Maricaulis maris MCS10
394503	periphery	Clostridium cellulolyticum	Clostridium cellulolyticum H10
395019	periphery	Burkholderia multivorans 17616	Burkholderia multivorans ATCC 17616 JGI
395491	periphery	Rhizobium leguminosarum WSM1325	Rhizobium leguminosarum bv  trifolii WSM1325
395492	periphery	Rhizobium leguminosarum WSM2304	Rhizobium leguminosarum bv  trifolii WSM2304
395495	core	Leptothrix cholodnii	Leptothrix cholodnii SP 6
395960	periphery	Rhodopseudomonas palustris TIE1	Rhodopseudomonas palustris TIE 1
395961	periphery	Cyanothece sp. 7425	Cyanothece PCC 7425
395962	periphery	Cyanothece sp. 8802	Cyanothece PCC 8802
395963	core	Beijerinckia indica	Beijerinckia indica ATCC 9039
395965	core	Methylocella silvestris	Methylocella silvestris BL2
396513	periphery	Staphylococcus carnosus	Staphylococcus carnosus TM300
396588	core	Thioalkalivibrio sp. HLEbGR7	Thioalkalivibrio HL EbGR7
397945	periphery	Acidovorax citrulli	Acidovorax avenae citrulli AAC00-1
397948	core	Caldivirga maquilingensis	Caldivirga maquilingensis IC-167
398527	periphery	Burkholderia phytofirmans PsJN	Burkholderia phytofirmans PsJN
398577	periphery	Burkholderia ambifaria MC40	Burkholderia ambifaria MC40 6
398578	core	Delftia acidovorans	Delftia acidovorans SPH-1
398579	periphery	Shewanella pealeana	Shewanella pealeana ATCC 700345
398580	core	Dinoroseobacter shibae	Dinoroseobacter shibae DFL 12
398767	periphery	Geobacter lovleyi	Geobacter lovleyi SZ
399549	core	Metallosphaera sedula	Metallosphaera sedula DSM 5348
399550	core	Staphylothermus marinus	Staphylothermus marinus F1
399599	periphery	Shewanella baltica OS195	Shewanella baltica OS195
399726	periphery	Thermoanaerobacter sp. X514	Thermoanaerobacter X514
399739	periphery	Pseudomonas mendocina	Pseudomonas mendocina ymp
399741	core	Serratia proteamaculans	Serratia proteamaculans 568
399742	periphery	Enterobacter sp. 638	Enterobacter 638
400667	periphery	Acinetobacter baumannii 17978	Acinetobacter baumannii ATCC 17978
400668	core	Marinomonas sp. MWYL1	Marinomonas MWYL1
400673	periphery	Legionella pneumophila Corby	Legionella pneumophila Corby
401473	periphery	Bifidobacterium dentium	Bifidobacterium dentium Bd1
401614	periphery	Francisella novicida	Francisella tularensis novicida U112
402612	periphery	Flavobacterium psychrophilum	Flavobacterium psychrophilum JIP02 86
402626	periphery	Ralstonia pickettii 12J	Ralstonia pickettii 12J
402880	periphery	Methanococcus maripaludis C5	Methanococcus maripaludis C5
402881	core	Parvibaculum lavamentivorans	Parvibaculum lavamentivorans DS-1
402882	periphery	Shewanella baltica OS185	Shewanella baltica OS185
403833	core	Petrotoga mobilis	Petrotoga mobilis SJ95
404380	periphery	Geobacter bemidjiensis	Geobacter bemidjiensis Bem
404589	periphery	Anaeromyxobacter sp. Fw1095	Anaeromyxobacter Fw109-5
405416	periphery	Acinetobacter baumannii ACICU	Acinetobacter baumannii ACICU
405440	periphery	Xylella fastidiosa M12	Xylella fastidiosa M12
405441	periphery	Xylella fastidiosa M23	Xylella fastidiosa M23
405531	periphery	Bacillus cereus G9842	Bacillus cereus G9842
405532	periphery	Bacillus cereus B4264	Bacillus cereus B4264
405534	periphery	Bacillus cereus AH187	Bacillus cereus AH187
405535	periphery	Bacillus cereus AH820	Bacillus cereus AH820
405566	periphery	Lactobacillus helveticus	Lactobacillus helveticus DPC 4571
405948	core	Saccharopolyspora erythraea	Saccharopolyspora erythraea NRRL 2338
405955	periphery	Escherichia coli APECO1	Escherichia coli APEC O1
406327	periphery	Methanococcus vannielii	Methanococcus vannielii SB
406425	periphery	Burkholderia cenocepacia MC03	Burkholderia cenocepacia MC0 3
407148	periphery	Campylobacter jejuni 81116	Campylobacter jejuni 81116
407976	periphery	Shewanella baltica OS223	Shewanella baltica OS223
409438	periphery	Escherichia coli SE11	Escherichia coli SE11
410289	periphery	Mycobacterium bovis 1173P2	Mycobacterium bovis BCG Pasteur 1173P2
410358	core	Methanocorpusculum labreanum	Methanocorpusculum labreanum Z
410359	periphery	Pyrobaculum calidifontis	Pyrobaculum calidifontis JCM 11548
411154	core	Gramella forsetii	Gramella forsetii KT0803
412022	periphery	Burkholderia mallei 10229	Burkholderia mallei NCTC 10229
412418	periphery	Borrelia recurrentis	Borrelia recurrentis A1
412419	periphery	Borrelia duttonii	Borrelia duttonii Ly
412694	periphery	Bacillus thuringiensis Hakam	Bacillus thuringiensis Al Hakam
412965	periphery	Vesicomyosocius okutanii	Candidatus Vesicomyosocius okutanii HA
413404	periphery	Ruthia magnifica	Candidatus Ruthia magnifica Cm Calyptogena magnifica 
413502	periphery	Cronobacter turicensis	Cronobacter turicensis
413997	periphery	Escherichia coli REL606	Escherichia coli B REL606
413999	periphery	Clostridium botulinum 3502	Clostridium botulinum A
414684	periphery	Rhodospirillum centenum	Rhodospirillum centenum SW
415426	core	Hyperthermus butylicus	Hyperthermus butylicus
416269	core	Actinobacillus pleuropneumoniae L20	Actinobacillus pleuropneumoniae L20
416276	periphery	Rickettsia massiliae	Rickettsia massiliae MTU5
416348	core	Halorubrum lacusprofundi	Halorubrum lacusprofundi ATCC 49239
416591	periphery	Thermotoga lettingae	Thermotoga lettingae TMO
416870	periphery	Lactococcus lactis MG1363	Lactococcus lactis cremoris MG1363
418127	periphery	Staphylococcus aureus Mu3	Staphylococcus aureus Mu3
418136	periphery	Francisella tularensis WY96	Francisella tularensis WY96-3418
419610	core	Methylobacterium extorquens PA1	Methylobacterium extorquens PA1
419665	periphery	Methanococcus aeolicus	Methanococcus aeolicus Nankai-3
419942	periphery	Sulfolobus islandicus YN1551	Sulfolobus islandicus Y N 15 51
419947	periphery	Mycobacterium tuberculosis H37Ra	Mycobacterium tuberculosis H37Ra
420246	periphery	Geobacillus thermodenitrificans	Geobacillus thermodenitrificans NG80-2
420247	core	Methanobrevibacter smithii	Methanobrevibacter smithii ATCC 35061
420662	core	Methylibium petroleiphilum	Methylibium petroleiphilum PM1
423368	periphery	Salmonella enterica Newport	Salmonella enterica serovar Newport SL254
425104	periphery	Shewanella sediminis	Shewanella sediminis HAW-EB3
426117	periphery	Methylobacterium sp. 446	Methylobacterium 4 46
426118	periphery	Sulfolobus islandicus M164	Sulfolobus islandicus M 16 4
426355	periphery	Methylobacterium radiotolerans	Methylobacterium radiotolerans JCM 2831
426368	periphery	Methanococcus maripaludis C7	Methanococcus maripaludis C7
426430	periphery	Staphylococcus aureus Newman	Staphylococcus aureus Newman
427317	periphery	Sulfolobus islandicus M1425	Sulfolobus islandicus M 14 25
427318	periphery	Sulfolobus islandicus M1627	Sulfolobus islandicus M 16 27
428406	periphery	Ralstonia pickettii 12D	Ralstonia pickettii 12D
429009	core	Ammonifex degensii	Ammonifex degensii KC4
429572	periphery	Sulfolobus islandicus LS215	Sulfolobus islandicus L S 2 15
430066	periphery	Brucella abortus S19	Brucella abortus S19
431943	periphery	Clostridium kluyveri 555	Clostridium kluyveri DSM 555
431947	periphery	Porphyromonas gingivalis 33277	Porphyromonas gingivalis ATCC 33277
434131	periphery	Neorickettsia risticii	Neorickettsia risticii Illinois
434271	periphery	Actinobacillus pleuropneumoniae JL03	Actinobacillus pleuropneumoniae serovar 3 JL03
434922	periphery	Coxiella burnetii Dugway	Coxiella burnetii Dugway 7E9-12
434923	periphery	Coxiella burnetii Q212	Coxiella burnetii CbuG Q212
434924	periphery	Coxiella burnetii Q154	Coxiella burnetii CbuK Q154
435590	periphery	Bacteroides vulgatus ATCC 8482	Bacteroides vulgatus ATCC 8482
435591	core	Parabacteroides distasonis	Parabacteroides distasonis ATCC 8503
436017	periphery	Ostreococcus lucimarinus	Ostreococcus lucimarinus CCE9901
436114	core	Sulfurihydrogenibium sp. YO3AOP1	Sulfurihydrogenibium YO3AOP1
436308	core	Nitrosopumilus maritimus	Nitrosopumilus maritimus SCM1
436907	periphery	Vanderwaltozyma polyspora	Vanderwaltozyma polyspora DSM 70294
438753	core	Azorhizobium caulinodans	Azorhizobium caulinodans ORS 571
439235	core	Desulfatibacillum alkenivorans	Desulfatibacillum alkenivorans AK 01
439375	core	Ochrobactrum anthropi	Ochrobactrum anthropi ATCC 49188
439386	periphery	Sulfolobus islandicus YG5714	Sulfolobus islandicus Y G 57 14
439843	periphery	Salmonella enterica CVM19633	Salmonella enterica serovar Schwarzengrund CVM19633
439851	periphery	Salmonella enterica Dublin	Salmonella enterica serovar Dublin CT 02021853
439855	periphery	Escherichia coli SMS35	Escherichia coli SMS 3 5
440085	periphery	Methylobacterium chloromethanicum	Methylobacterium chloromethanicum CM4
441620	periphery	Methylobacterium populi	Methylobacterium populi BJ001
441768	core	Acholeplasma laidlawii	Acholeplasma laidlawii PG 8A
441770	periphery	Clostridium botulinum 19397	Clostridium botulinum A ATCC 19397
441771	periphery	Clostridium botulinum Hall	Clostridium botulinum A Hall
441772	periphery	Clostridium botulinum Langeland	Clostridium botulinum F Langeland
441952	periphery	Francisella tularensis FSC147	Francisella tularensis mediasiatica FSC147
442563	periphery	Bifidobacterium animalis AD011	Bifidobacterium animalis lactis AD011
443144	periphery	Geobacter sp. M21	Geobacter M21
443906	core	Clavibacter michiganensis 382	Clavibacter michiganensis NCPPB 382
444157	core	Thermoproteus neutrophilus	Thermoproteus neutrophilus V24Sta
444158	periphery	Methanococcus maripaludis C6	Methanococcus maripaludis C6
444177	core	Lysinibacillus sphaericus	Lysinibacillus sphaericus C3 41
444178	periphery	Brucella ovis	Brucella ovis
444179	core	Sulcia muelleri GWSS	Candidatus Sulcia muelleri GWSS
444450	periphery	Escherichia coli EC4115	Escherichia coli O157 H7 EC4115
445932	core	Elusimicrobium minutum	Elusimicrobium minutum Pei191
445985	periphery	Borrelia burgdorferi ZS7	Borrelia burgdorferi ZS7
446462	core	Actinosynnema mirum	Actinosynnema mirum DSM 43827
446465	core	Brachybacterium faecium	Brachybacterium faecium DSM 4810
446471	core	Xylanimonas cellulosilytica	Xylanimonas cellulosilytica DSM 15894
447217	periphery	Anaeromyxobacter sp. K	Anaeromyxobacter K
448385	core	Sorangium cellulosum	Sorangium cellulosum  So ce 56 
449447	core	Microcystis aeruginosa	Microcystis aeruginosa NIES 843
450851	core	Phenylobacterium zucineum	Phenylobacterium zucineum HLK1
451515	periphery	Staphylococcus aureus FPR3757	Staphylococcus aureus USA300 FPR3757
451516	periphery	Staphylococcus aureus TCH1516	Staphylococcus aureus USA300 TCH1516
452471	core	Amoebophilus asiaticus	Candidatus Amoebophilus asiaticus 5a2
452637	core	Opitutus terrae	Opitutus terrae PB90 1
452638	periphery	Polynucleobacter necessarius STIR1	Polynucleobacter necessarius STIR1
452659	periphery	Rickettsia rickettsii Iowa	Rickettsia rickettsii Iowa
452863	periphery	Arthrobacter chlorophenolicus	Arthrobacter chlorophenolicus A6
453591	core	Ignicoccus hospitalis	Ignicoccus hospitalis KIN4 I
454166	periphery	Salmonella enterica Agona	Salmonella enterica serovar Agona SL483
454169	periphery	Salmonella enterica Heidelberg	Salmonella enterica serovar Heidelberg SL476
455434	periphery	Treponema pallidum SS14	Treponema pallidum SS14
455488	periphery	Anaeromyxobacter dehalogenans 2CP1	Anaeromyxobacter dehalogenans 2CP 1
455632	periphery	Streptomyces griseus	Streptomyces griseus NBRC 13350
456442	periphery	Methanoregula boonei	Candidatus Methanoregula boonei 6A8
456481	periphery	Leptospira biflexa Paris	Leptospira biflexa serovar Patoc  Patoc 1  Paris 
457570	core	Natranaerobius thermophilus	Natranaerobius thermophilus JW NM WN LF
458233	core	Macrococcus caseolyticus	Macrococcus caseolyticus JCSC5402
458234	periphery	Francisella tularensis FTNF002	Francisella tularensis holarctica FTNF002 00
458817	periphery	Shewanella halifaxensis	Shewanella halifaxensis HAW EB4
460265	periphery	Methylobacterium nodulans	Methylobacterium nodulans ORS 2060
465515	core	Micrococcus luteus	Micrococcus luteus NCTC 2665
465817	periphery	Erwinia tasmaniensis	Erwinia tasmaniensis
467705	periphery	Streptococcus gordonii	Streptococcus gordonii Challis substr CH1
469008	periphery	Escherichia coli BL21	Escherichia coli BL21 DE3
469378	core	Cryptobacterium curtum	Cryptobacterium curtum DSM 15641
470137	periphery	Brucella suis 23445	Brucella suis ATCC 23445
471223	periphery	Geobacillus sp. WCH70	Geobacillus WCH70
471472	periphery	Chlamydia trachomatis 434/Bu	Chlamydia trachomatis 434 Bu
471473	periphery	Chlamydia trachomatis UCH1	Chlamydia trachomatis L2b UCH 1 proctitis
471821	core	Uncultered bacterium TG1RsD17	uncultured Termite group 1 bacterium phylotype Rs D17
471852	core	Thermomonospora curvata	Thermomonospora curvata DSM 43183
471853	core	Beutenbergia cavernae	Beutenbergia cavernae DSM 12333
471854	core	Dyadobacter fermentans	Dyadobacter fermentans DSM 18053
471855	core	Slackia heliotrinireducens	Slackia heliotrinireducens DSM 20476
471856	core	Jonesia denitrificans	Jonesia denitrificans DSM 20603
471857	core	Saccharomonospora viridis	Saccharomonospora viridis DSM 43017
471876	periphery	Streptococcus pyogenes NZ131	Streptococcus pyogenes NZ131
476213	periphery	Salmonella enterica RKS4594	Salmonella enterica serovar Paratyphi C RKS4594
477974	core	Desulforudis audaxviator	Candidatus Desulforudis audaxviator MP104C
478009	periphery	Halobacterium salinarum	Halobacterium salinarum R1
478434	periphery	Mycobacterium tuberculosis 1435	Mycobacterium tuberculosis KZN 1435
478801	core	Kytococcus sedentarius	Kytococcus sedentarius DSM 20547
479431	core	Nakamurella multipartita	Nakamurella multipartita DSM 44233
479432	core	Streptosporangium roseum	Streptosporangium roseum DSM 43021
479433	core	Catenulispora acidiphila	Catenulispora acidiphila DSM 44928
479434	core	Sphaerobacter thermophilus	Sphaerobacter thermophilus DSM 20745
479436	core	Veillonella parvula	Veillonella parvula DSM 2008
479437	core	Eggerthella lenta	Eggerthella lenta DSM 2243
480119	periphery	Acinetobacter baumannii AB0057	Acinetobacter baumannii AB0057
480224	periphery	Chloroflexus sp. Y400	Chloroflexus Y 400 fl
481448	core	Methylacidiphilum infernorum	Methylacidiphilum infernorum V4
481743	periphery	Geobacillus sp. Y412MC10	Geobacillus Y412MC10
481805	periphery	Escherichia coli 8739	Escherichia coli C ATCC 8739
483179	periphery	Brucella canis 23365	Brucella canis ATCC 23365
484019	periphery	Thermosipho africanus	Thermosipho africanus TCF52B
484021	periphery	Klebsiella pneumoniae K2044	Klebsiella pneumoniae NTUH K2044
484022	periphery	Francisella philomiragia	Francisella philomiragia ATCC 25017
485914	core	Halomicrobium mukohataei	Halomicrobium mukohataei DSM 12286
485915	core	Desulfohalobium retbaense	Desulfohalobium retbaense DSM 5692
485916	periphery	Desulfotomaculum acetoxidans	Desulfotomaculum acetoxidans DSM 771
485917	core	Pedobacter heparinus	Pedobacter heparinus DSM 2366
485918	core	Chitinophaga pinensis	Chitinophaga pinensis DSM 2588
486410	periphery	Streptococcus dysgalactiae	Streptococcus dysgalactiae equisimilis GGS 124
487213	periphery	Streptococcus pneumoniae 19F14	Streptococcus pneumoniae Taiwan19F 14
487214	periphery	Streptococcus pneumoniae 19A6	Streptococcus pneumoniae Hungary19A 6
488221	periphery	Streptococcus pneumoniae 70585	Streptococcus pneumoniae 70585
488222	periphery	Streptococcus pneumoniae JJA	Streptococcus pneumoniae JJA
488223	periphery	Streptococcus pneumoniae P1031	Streptococcus pneumoniae P1031
490899	core	Desulfurococcus kamchatkensis	Desulfurococcus kamchatkensis 1221n
491915	core	Anoxybacillus flavithermus	Anoxybacillus flavithermus WK1
491916	periphery	Rhizobium etli CIAT652	Rhizobium etli CIAT 652
498211	core	Cellvibrio japonicus	Cellvibrio japonicus Ueda107
498213	periphery	Clostridium botulinum Okra	Clostridium botulinum B1 Okra
498214	periphery	Clostridium botulinum Maree	Clostridium botulinum A3 Loch Maree
498217	periphery	Edwardsiella tarda	Edwardsiella tarda EIB202
498761	core	Heliobacterium modesticaldum	Heliobacterium modesticaldum Ice1
500485	periphery	Penicillium chrysogenum	Penicillium chrysogenum Wisconsin 54-1255
502025	core	Haliangium ochraceum	Haliangium ochraceum DSM 14365
502800	periphery	Yersinia pseudotuberculosis YPIII	Yersinia pseudotuberculosis YPIII
502801	periphery	Yersinia pseudotuberculosis PB1	Yersinia pseudotuberculosis PB1 
504474	periphery	Corynebacterium urealyticum	Corynebacterium urealyticum DSM 7109
504832	core	Oligotropha carboxidovorans	Oligotropha carboxidovorans OM5
505682	periphery	Ureaplasma parvum 27815	Ureaplasma parvum serovar 3 ATCC 27815
507522	periphery	Klebsiella pneumoniae 342	Klebsiella pneumoniae 342
508765	periphery	Clostridium botulinum Eklund	Clostridium botulinum B Eklund 17B
508767	periphery	Clostridium botulinum Alaska	Clostridium botulinum E3 Alaska E43
509169	periphery	Xanthomonas campestris B100	Xanthomonas campestris B100
509170	periphery	Acinetobacter baumannii SDF	Acinetobacter baumannii SDF
509173	periphery	Acinetobacter baumannii AYE	Acinetobacter baumannii AYE
511145	core	Escherichia coli K12_MG1655	Escherichia coli K 12 substr  MG1655
511995	core	Azobacteroides pseudotrichonymphae	Candidatus Azobacteroides pseudotrichonymphae genomovar  CFP2
512562	periphery	Helicobacter pylori Shi470	Helicobacter pylori Shi470
512566	periphery	Streptococcus pneumoniae G54	Streptococcus pneumoniae G54
515619	periphery	Eubacterium rectale	Eubacterium rectale ATCC 33656
515620	core	Eubacterium eligens	Eubacterium eligens ATCC 27750
515621	periphery	Clostridium botulinum 657	Clostridium botulinum Ba4 657
515635	periphery	Dictyoglomus turgidum	Dictyoglomus turgidum DSM 6724
516950	periphery	Streptococcus pneumoniae CGSP14	Streptococcus pneumoniae CGSP14
517417	core	Chlorobaculum parvum	Chlorobaculum parvum NCIB 8327
517418	core	Chloroherpeton thalassium	Chloroherpeton thalassium ATCC 35110
518766	core	Rhodothermus marinus	Rhodothermus marinus DSM 4252
519441	core	Streptobacillus moniliformis	Streptobacillus moniliformis DSM 12112
519442	core	Halorhabdus utahensis	Halorhabdus utahensis DSM 12940
521006	periphery	Neisseria gonorrhoeae 11945	Neisseria gonorrhoeae NCCP11945
521011	core	Methanosphaerula palustris	Candidatus Methanosphaerula palustris E1 9c
521045	core	Kosmotoga olearia	Kosmotoga olearia TBF 19 5 1
521095	core	Atopobium parvulum	Atopobium parvulum DSM 20469
521097	core	Capnocytophaga ochracea	Capnocytophaga ochracea DSM 7271
521098	core	Alicyclobacillus acidocaldarius	Alicyclobacillus acidocaldarius DSM 446
521460	core	Anaerocellum thermophilum	Anaerocellum thermophilum DSM 6725
522306	core	Accumulibacter phosphatis	Candidatus Accumulibacter phosphatis clade IIA UW 1
522373	core	Stenotrophomonas maltophilia K279a	Stenotrophomonas maltophilia K279a
523791	core	Kangiella koreensis	Kangiella koreensis DSM 16069
523794	core	Leptotrichia buccalis	Leptotrichia buccalis DSM 1135
523850	periphery	Thermococcus onnurineus	Thermococcus onnurineus NA1
525146	periphery	Desulfovibrio desulfuricans 27774	Desulfovibrio desulfuricans ATCC 27774
525897	core	Desulfomicrobium baculatum	Desulfomicrobium baculatum DSM 4028
525898	core	Sulfurospirillum deleyianum	Sulfurospirillum deleyianum DSM 6946
525903	core	Thermanaerovibrio acidaminovorans	Thermanaerovibrio acidaminovorans DSM 6589
525904	core	Thermobaculum terrenum	Thermobaculum terrenum ATCC BAA 798
525909	periphery	Acidimicrobium ferrooxidans	Acidimicrobium ferrooxidans DSM 10331
525919	core	Anaerococcus prevotii	Anaerococcus prevotii DSM 20548
526218	core	Sebaldella termitidis	Sebaldella termitidis ATCC 33386
526222	periphery	Desulfovibrio salexigens	Desulfovibrio salexigens DSM 2638
526226	core	Gordonia bronchialis	Gordonia bronchialis DSM 43247
529507	core	Proteus mirabilis	Proteus mirabilis
531844	core	Flavobacteriaceae bacterium	Flavobacteriaceae bacterium 3519 10
535289	core	Diaphorobacter sp. TPSY	Diaphorobacter TPSY
536230	periphery	Burkholderia pseudomallei MSHR346	Burkholderia pseudomallei MSHR346
536232	periphery	Clostridium botulinum Kyoto	Clostridium botulinum A2 Kyoto
537021	core	Liberibacter asiaticus	Candidatus Liberibacter asiaticus psy62
537457	periphery	Actinobacillus pleuropneumoniae AP76	Actinobacillus pleuropneumoniae serovar 7 AP76
543728	core	Variovorax paradoxus	Variovorax paradoxus S110
543734	periphery	Lactobacillus casei BL23	Lactobacillus casei
544404	periphery	Escherichia coli TW14359	Escherichia coli O157 H7 TW14359
544556	periphery	Geobacillus sp. Y412MC61	Geobacillus Y412MC61
546272	periphery	Brucella melitensis 23457	Brucella melitensis ATCC 23457
546414	periphery	Deinococcus deserti	Deinococcus deserti VCD115
550537	periphery	Salmonella enterica Enteritidis	Salmonella enterica serovar Enteritidis P125109
550538	periphery	Salmonella enterica Gallinarium	Salmonella enterica serovar Gallinarum 287 91
552526	periphery	Streptococcus equi MGCS10565	Streptococcus equi zooepidemicus MGCS10565
552536	periphery	Listeria monocytogenes HCC23	Listeria monocytogenes HCC23
553482	periphery	Streptococcus equi 4047	Streptococcus equi 4047
553483	periphery	Streptococcus equi H70	Streptococcus equi zooepidemicus
554290	periphery	Salmonella enterica AKU12601	Salmonella enterica serovar Paratyphi A AKU 12601
555778	core	Halothiobacillus neapolitanus	Halothiobacillus neapolitanus c2
555970	periphery	Bifidobacterium animalis 10140	Bifidobacterium animalis lactis DSM 10140
557433	periphery	Lactobacillus reuteri 1112	Lactobacillus reuteri F275 Kitasato
557436	periphery	Lactobacillus reuteri 20016	Lactobacillus reuteri DSM 20016
557598	core	Laribacter hongkongensis	Laribacter hongkongensis HLHK9
557600	periphery	Acinetobacter baumannii AB307	Acinetobacter baumannii AB307 0294
557722	periphery	Pseudomonas aeruginosa LESB58	Pseudomonas aeruginosa LESB58
557723	periphery	Haemophilus parasuis SH0165	Haemophilus parasuis SH0165
557760	periphery	Rhodobacter sphaeroides KD131	Rhodobacter sphaeroides KD131
559295	periphery	Lachancea thermotolerans	Lachancea thermotolerans CBS 6340
559307	periphery	Zygosaccharomyces rouxii	Zygosaccharomyces rouxii CBS 732
561007	periphery	Mycobacterium abscessus	Mycobacterium abscessus ATCC 19977
561229	periphery	Dickeya zeae	Dickeya zeae Ech1591
561230	periphery	Pectobacterium carotovorum	Pectobacterium carotovorum PC1
561231	periphery	Pectobacterium wasabiae	Pectobacterium wasabiae WPP163
561275	periphery	Mycobacterium bovis 172	Mycobacterium bovis BCG Tokyo 172
561276	periphery	Streptococcus pneumoniae 700669	Streptococcus pneumoniae ATCC 700669
561304	periphery	Mycobacterium leprae Br4923	Mycobacterium leprae Br4923
561501	periphery	Buchnera aphidicola ApTuc7	Buchnera aphidicola Tuc7  Acyrthosiphon pisum 
562019	periphery	Rickettsia peacockii	Rickettsia peacockii Rustic
563041	periphery	Helicobacter pylori G27	Helicobacter pylori G27
563178	periphery	Buchnera aphidicola Ap5A	Buchnera aphidicola 5A  Acyrthosiphon pisum 
565034	core	Brachyspira hyodysenteriae	Brachyspira hyodysenteriae WA1
565050	periphery	Caulobacter crescentus NA1000	Caulobacter crescentus NA1000
565575	periphery	Ureaplasma urealyticum	Ureaplasma urealyticum serovar 10 ATCC 33699
568206	periphery	Bacillus anthracis 684	Bacillus anthracis CDC 684
568703	periphery	Lactobacillus rhamnosus GG	Lactobacillus rhamnosus GG
568704	periphery	Lactobacillus rhamnosus 705	Lactobacillus rhamnosus Lc 705
568813	periphery	Streptococcus suis SC84	Streptococcus suis SC84
568814	periphery	Streptococcus suis BM407	Streptococcus suis BM407
568815	periphery	Brucella microti	Brucella microti CCM 4915
570417	periphery	Wolbachia sp. Cql	Wolbachia endosymbiont of Culex quinquefasciatus Pel
570508	periphery	Helicobacter pylori P12	Helicobacter pylori P12
572264	periphery	Bacillus cereus 03BB102	Bacillus cereus 03BB102
572265	core	Hamiltonella defensa	Candidatus Hamiltonella defensa 5AT  Acyrthosiphon pisum 
573064	periphery	Methanocaldococcus fervens	Methanocaldococcus fervens AG86
573234	core	Hodgkinia cicadicola	Candidatus Hodgkinia cicadicola Dsem
573235	periphery	Escherichia coli 11368	Escherichia coli O26 H11 11368
573370	periphery	Desulfovibrio magneticus	Desulfovibrio magneticus RS 1
573826	periphery	Candida dubliniensis	Candida dubliniensis CD36
574521	periphery	Escherichia coli E2348	Escherichia coli 0127 H6 E2348 69
574556	periphery	Anaplasma centrale	Anaplasma centrale Israel
575788	periphery	Vibrio splendidus	Vibrio splendidus LGP32
579112	periphery	Vibrio cholerae M662	Vibrio cholerae M66 2
579137	periphery	Methanocaldococcus vulcanius	Methanocaldococcus vulcanius M7
579405	core	Dickeya dadantii Ech703	Dickeya dadantii Ech703
580049	periphery	Chlamydia trachomatis Jali20	Chlamydia trachomatis B Jali20 OT
580050	periphery	Bifidobacterium animalis Bl04	Bifidobacterium animalis lactis Bl 04
582402	core	Hirschia baltica	Hirschia baltica ATCC 49814
582744	core	Methylovorus sp. SIP34	Methylovorus SIP3 4
583345	core	Methylotenera mobilis	Methylotenera mobilis JLW8
583346	periphery	Clostridium kluyveri 12016	Clostridium kluyveri NBRC 12016
585034	periphery	Escherichia coli IAI1	Escherichia coli IAI1
585035	periphery	Escherichia coli S88	Escherichia coli S88
585054	periphery	Escherichia fergusonii	Escherichia fergusonii ATCC 35469
585055	periphery	Escherichia coli 55989	Escherichia coli 55989
585056	periphery	Escherichia coli UMN026	Escherichia coli UMN026
585057	periphery	Escherichia coli IAI39	Escherichia coli IAI39
585395	periphery	Escherichia coli 12009	Escherichia coli O103 H2 12009
585396	periphery	Escherichia coli 11128	Escherichia coli O111 H  11128
585397	periphery	Escherichia coli ED1a	Escherichia coli ED1a
590168	periphery	Thermotoga naphthophila	Thermotoga naphthophila RKU 10
590409	periphery	Dickeya dadantii Ech586	Dickeya dadantii Ech586
592021	periphery	Bacillus anthracis A0248	Bacillus anthracis A0248
592205	periphery	Helicobacter pylori B38	Helicobacter pylori B38
593117	periphery	Thermococcus gammatolerans	Thermococcus gammatolerans EJ3
593588	periphery	Vibrio cholerae MJ1236	Vibrio cholerae MJ 1236
595494	core	Tolumonas auensis	Tolumonas auensis DSM 9187
595496	periphery	Escherichia coli BW2952	Escherichia coli BW2952
595499	periphery	Sulcia muelleri SMDSEM	Candidatus Sulcia muelleri SMDSEM
598659	core	Nautilia profundicola	Nautilia profundicola AmH
600809	core	Blattabacterium sp. BPLAN	Blattabacterium  Periplaneta americana  BPLAN
604354	periphery	Thermococcus sibiricus	Thermococcus sibiricus MM 739
622759	periphery	Zymomonas mobilis 11163	Zymomonas mobilis NCIMB 11163
626418	periphery	Burkholderia glumae	Burkholderia glumae BGR1
632772	periphery	Rhodococcus opacus	Rhodococcus opacus B4
633699	periphery	Lactobacillus johnsonii FI9785	Lactobacillus johnsonii FI9785
634176	core	Aggregatibacter aphrophilus	Aggregatibacter aphrophilus NJ8700
634178	periphery	Listeria monocytogenes 80459	Listeria monocytogenes Clip81459
634452	core	Acetobacter pasteurianus	Acetobacter pasteurianus IFO 3283 01
634499	periphery	Erwinia pyrifoliae	Erwinia pyrifoliae Ep1 96
634503	core	Edwardsiella ictaluri	Edwardsiella ictaluri 93 146
634504	periphery	Bartonella grahamii as4aup	Bartonella grahamii as4aup
644042	periphery	Lactobacillus plantarum JDM1	Lactobacillus plantarum JDM1
644223	periphery	Pichia pastoris	Pichia pastoris GS115
645127	periphery	Corynebacterium kroppenstedtii	Corynebacterium kroppenstedtii DSM 44385
645462	periphery	Clostridium difficile CD196	Clostridium difficile CD196
645463	periphery	Clostridium difficile R20291	Clostridium difficile R20291
661410	periphery	Methylobacterium extorquens DM4	Methylobacterium extorquens DM4
662598	periphery	Neisseria meningitidis alpha14	Neisseria meningitidis alpha14
665079	periphery	Sclerotinia sclerotiorum	Sclerotinia sclerotiorum 1980 UF-70
668336	periphery	Aggregatibacter actinomycetemcomitans	Aggregatibacter actinomycetemcomitans D11S 1
672161	periphery	Chlamydia trachomatis TZ1A828	Chlamydia trachomatis B TZ1A828 OT
680646	core	Rothia mucilaginosa	Rothia mucilaginosa
681288	periphery	Staphylococcus aureus ED98	Staphylococcus aureus ED98
684738	periphery	Lactococcus lactis KF147	Lactococcus lactis KF147
688245	core	Comamonas testosteroni	Comamonas testosteroni CNB 1
